SNPnexus for Covid-19
Query information, Visualisations and Tools
  • Dataset Name: A1slim_B1slim_C1slim_C2slim_D1slim_zipped
  • Human Assembly: GRCh38/hg38
  • Number of valid queries: 5
  • Total Number of variants: 20488
  • Export your annotation results:
  • If a filter has been applied, the exported results will respect the filter.
  • These results will be available until 11:01 a.m., 03 Dec 2020 (GMT)
    Filter results by:
    ✷ Show variants with global population freq. lower or equal than the threshold (e.g. 0.1)
    Add Pathways to filter or leave empty to query all Pathways
    Add Genes to filter or leave empty to query all Genes
    Annotation Results
  • Cohort-wide plot:
  • MAF Tools Visualisations
  • Manhattan Plot
  • Dataset (File)-wide plots:
  • The following visualisations reflect the filters applied to the results
  • Predicted functional consequences
  • Karyotype of genomic consequences
  • Reactome Pathways Enrichment Graph
  • Bar plot of predicted deleterious effect
  • Karyotype of predicted deleteriousness
  • Drug-Target-Phenotype Network